Sequenced genes (ureC gene) and a metagenome from Archaea in Arctic and Antarctic marine environments

最新版本 由 SCAR - Microbial Antarctic Resource System 發佈於 Mar 19, 2019 SCAR - Microbial Antarctic Resource System

Microbial dataset containing sequenced genes (ureC gene) from Thaumarchaeota from the Beaufort Sea (Arctic) and the Amundsen Sea (Antarctica), as well as a metagenome (454 pyrosequencing) the Beaufort Sea.

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版本

The table below shows only published versions of the resource that are publicly accessible.

如何引用

研究者應依照以下指示引用此資源。:

Alonso-Saez L, Waller A, Bakker K, Farnelid H, Yager P, Lovejoy C, Tremblay J, Potvin M, Heinrich F, Estrada M, Riemann L, Bork P, Pedros-Alio C, Bertilsson S (2019): Sequenced genes (ureC gene) and a metagenome from Archaea in Arctic and Antarctic marine environments. v1.1. SCAR - Microbial Antarctic Resource System. Dataset/Metadata. https://ipt.biodiversity.aq/resource?r=arctic_antarctic_marine_archaea&v=1.1

Rights

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The publisher and rights holder of this work is SCAR - Microbial Antarctic Resource System. This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.

GBIF 註冊

此資源已向GBIF註冊，並指定以下之GBIF UUID: 53fb0f04-3ba5-4fe8-8ea4-0511914bd0c3。  SCAR - Microbial Antarctic Resource System 發佈此資源，並經由Scientific Committee on Antarctic Research同意向GBIF註冊成為資料發佈者。

關鍵字

Metadata

聯絡資訊

資源建立者:

Laura Alonso-Saez
Uppsala University Uppsala SE
Alion Waller
European Molecular Biology Laboratory Heidelberg DE
Kevin Bakker
University of Michigan Ann Arbor US
Hanna Farnelid
Linnaeus University Kalmar SE
Patricia Yager
University of Georgia Athens US
Connie Lovejoy
Université Laval Québec CA
Jean-Eric Tremblay
Université Laval Québec CA
Marianne Potvin
Université Laval Québec CA
Frederike Heinrich
Uppsala University Uppsala SE
Marta Estrada
Institut de Ciències del Mar Barcelona ES
Lasse Riemann
University of Copenhagen Helsingør DK
Peer Bork
European Molecular Biology Laboratory Heidelberg DE
Carlos Pedros-Alio
Institut de Ciències del Mar Barcelona ES
Stefan Bertilsson
Uppsala University Uppsala SE

可回覆此資源相關問題者:

Laura Alonso-Saez
Uppsala University Uppsala SE

元數據填寫者:

Maxime Sweetlove
Research assistent
Royal Belgian Institute for Natural Sciences 1000 Brussels BE

與此資源的相關者:

使用者

地理涵蓋範圍

Amundsen Sea (Antarctica, Southern Ocean); Beaufort Sea (Arctic)

界定座標範圍 緯度南界 經度西界 [-77.02, -123.897], 緯度北界 經度東界 [71.033, 170.5]

分類群涵蓋範圍

Archaea

Domain  Archaea (Archaea)

計畫資料

無相關描述

計畫名稱 Sequenced genes (ureC gene) and a metagenome from Archaea in Arctic and Antarctic marine environments
經費來源 454 pyrosequencing was supported by the K&A Wallemberg foundation. This work is a contribution to the International Polar Year–CFL system study (2007/2008) supported through grants from the Canadian International Polar Year Federal Program Office and the Natural Sciences and Engineering Research Council (NSERC) Canada, the Spanish Ministry of Science and Innovation Grant Boreal CLG2007-28872-E/ANT, and the Swedish Research Council. Additional support was given by the Marie Curiellowship PIEFGA-2008-221121 and a “Juan de la Cierva” contract from the Spanish Ministry of Science and Innovation. We acknowledge support by the National Science Foundation Antarctic Organisms and Ecosystems ProgramGrants ANT-0741409 and ANT-08361440; Swedish Research Council Environment, Agricultural Sciences, and Spatial Planning Grant 217- 2006-342; and NSERC of Canada.

The personnel involved in the project:

Laura Alonso-Saez

取樣方法

Samples were collected by using a ship-deployed rosette for open water sampling and through the ship’s internal moon pool for winter ice-covered sampling.

研究範圍 Water samples were collected near the surface and in deeper halocline waters from the Arctic Southeast Beaufort Sea during the overwintering CFL cruise and in the upper 500 m from the Antarctic Amundsen and Ross seas during the summer in the Oden Southern Ocean cruise.

方法步驟描述:

  1. details are given in: https://www.pnas.org/content/pnas/suppl/2012/09/27/1201914109.DCSupplemental/sapp.pdf

引用文獻

  1. Alonso-Sáez, L., Waller, A. S., Mende, D. R., Bakker, K., Farnelid, H., Yager, P. L., ... & Estrada, M. (2012). Role for urea in nitrification by polar marine Archaea. Proceedings of the National Academy of Sciences, 109(44), 17989-17994.

額外的元數據

替代的識別碼 53fb0f04-3ba5-4fe8-8ea4-0511914bd0c3
https://ipt.biodiversity.aq/resource?r=arctic_antarctic_marine_archaea